package biocaml

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package biocaml
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Module Biocaml_unix.SgrSource

Sequence Graph (SGR) files.

Sourcetype t
Sourceexception Bad of string
Sourceval of_channel : ?chr_map:(string -> string) -> ?increment_bp:int -> Core.In_channel.t -> t
Sourceval of_file : ?chr_map:(string -> string) -> ?increment_bp:int -> string -> t
Sourceval of_list : (string * int * float) list -> t
Sourceval of_chr_lists : (string * (int * float) list) list -> t
Sourceval to_channel : ?chr_map:(string -> string) -> ?increment_bp:int -> t -> Core.Out_channel.t -> unit
Sourceval to_file : ?chr_map:(string -> string) -> ?increment_bp:int -> t -> string -> unit

Items will be printed in ascending order by (chr,coord).

Sourceval to_list : t -> (string * int * float) list

Items will be returned in ascending order by (chr,coord).

Sourceval to_chr_lists : t -> (string * (int * float) list) list

Outer list will be in ascending order by chr, and inner lists will be in ascending order by coord.

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