package biocaml

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package biocaml
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Module Make.LSetSource

A set of locations (e.g. a set of gene loci)

Sourcetype t
Sourceval to_stream : t -> location Stream.t
Sourceval of_stream : location Stream.t -> t
Sourceval intersects : t -> location -> bool

intersects lset loc returns true if loc has a non-empty intersection with one of the locations in lset, and returns false otherwise

Sourceval closest : t -> location -> (location * int) option

closest lset loc returns the location in lset that is the closest to loc, along with the actual (minimal) distance. Returns None if there is no location in lset that comes from the same chromosome than loc.

Sourceval intersecting_elems : t -> location -> location Stream.t

intersecting_elems lset loc returns a stream of all locations in lset that intersect loc.

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