package octez-internal-libs
A package that contains some libraries used by the Octez suite
Install
Dune Dependency
Authors
Maintainers
Sources
tezos-octez-v20.1.tag.bz2
sha256=ddfb5076eeb0b32ac21c1eed44e8fc86a6743ef18ab23fff02d36e365bb73d61
sha512=d22a827df5146e0aa274df48bc2150b098177ff7e5eab52c6109e867eb0a1f0ec63e6bfbb0e3645a6c2112de3877c91a17df32ccbff301891ce4ba630c997a65
doc/src/irmin_pack_unix/store.ml.html
Source file store.ml
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(* * Copyright (c) 2018-2022 Tarides <contact@tarides.com> * * Permission to use, copy, modify, and distribute this software for any * purpose with or without fee is hereby granted, provided that the above * copyright notice and this permission notice appear in all copies. * * THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES * WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF * MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR * ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES * WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN * ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF * OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE. *) open! Import include Store_intf module Maker (Config : Conf.S) = struct type endpoint = unit include Pack_key.Store_spec module Make (Schema : Irmin.Schema.Extended) = struct open struct module P = Schema.Path module M = Schema.Metadata module C = Schema.Contents module B = Schema.Branch end module H = Schema.Hash module Io = Io.Unix module Index = Pack_index.Make (H) module Errs = Io_errors.Make (Io) module File_manager = File_manager.Make (Io) (Index) (Errs) module Dict = Dict.Make (File_manager) module Dispatcher = Dispatcher.Make (File_manager) module XKey = Pack_key.Make (H) module X = struct module Hash = H type 'a value = { hash : H.t; kind : Pack_value.Kind.t; v : 'a } [@@deriving irmin] module Contents = struct module Pack_value = Pack_value.Of_contents (Config) (H) (XKey) (C) module CA = Pack_store.Make (File_manager) (Dict) (Dispatcher) (H) (Pack_value) (Errs) include Irmin.Contents.Store_indexable (CA) (H) (C) end module Node = struct module Value = Schema.Node (XKey) (XKey) module CA = struct module Inter = Irmin_pack.Inode.Make_internal (Config) (H) (XKey) (Value) module Pack' = Pack_store.Make (File_manager) (Dict) (Dispatcher) (H) (Inter.Raw) (Errs) include Inode.Make_persistent (H) (Value) (Inter) (Pack') end include Irmin.Node.Generic_key.Store (Contents) (CA) (H) (CA.Val) (M) (P) end module Node_portable = Node.CA.Val.Portable module Schema = struct include Schema module Node = Node end module Commit = struct module Value = struct include Schema.Commit (Node.Key) (XKey) module Info = Schema.Info type hash = Hash.t [@@deriving irmin] end module Pack_value = Pack_value.Of_commit (H) (XKey) (Value) module CA = Pack_store.Make (File_manager) (Dict) (Dispatcher) (H) (Pack_value) (Errs) include Irmin.Commit.Generic_key.Store (Schema.Info) (Node) (CA) (H) (Value) end module Commit_portable = struct module Hash_key = Irmin.Key.Of_hash (Hash) include Schema.Commit (Hash_key) (Hash_key) let of_commit : Commit.Value.t -> t = fun t -> let info = Commit.Value.info t and node = Commit.Value.node t |> XKey.to_hash and parents = Commit.Value.parents t |> List.map XKey.to_hash in v ~info ~node ~parents module Info = Schema.Info type hash = Hash.t [@@deriving irmin] end module Branch = struct module Key = B module Val = XKey module AW = Atomic_write.Make_persistent (Key) (Val) include Atomic_write.Closeable (AW) let v ?fresh ?readonly path = AW.v ?fresh ?readonly path >|= make_closeable end module Slice = Irmin.Backend.Slice.Make (Contents) (Node) (Commit) module Remote = Irmin.Backend.Remote.None (Commit.Key) (B) module Gc = Gc.Make (struct module Async = Async.Unix module Fm = File_manager module Errs = Errs module Dict = Dict module Dispatcher = Dispatcher module Hash = Schema.Hash module Contents_store = Contents.CA module Node_value = Node.CA.Inter.Val module Node_store = Node.CA module Commit_value = Commit.Value module Commit_store = Commit.CA type hash = Node_value.hash type key = Node_value.node_key [@@deriving irmin] end) module Repo = struct type running_gc = { gc : Gc.t; use_auto_finalisation : bool } type t = { lru : Lru.t; config : Irmin.Backend.Conf.t; contents : read Contents.CA.t; node : read Node.CA.t; commit : read Commit.CA.t; branch : Branch.t; fm : File_manager.t; dict : Dict.t; dispatcher : Dispatcher.t; mutable during_batch : bool; mutable running_gc : running_gc option; } let pp_key = Irmin.Type.pp XKey.t let contents_t t : 'a Contents.t = t.contents let node_t t : 'a Node.t = (contents_t t, t.node) let commit_t t : 'a Commit.t = (node_t t, t.commit) let branch_t t = t.branch let config t = t.config let v config = let root = Irmin_pack.Conf.root config in let fresh = Irmin_pack.Conf.fresh config in let fm = let readonly = Irmin_pack.Conf.readonly config in if readonly then File_manager.open_ro config |> Errs.raise_if_error else match (Io.classify_path root, fresh) with | `No_such_file_or_directory, _ -> File_manager.create_rw ~overwrite:false config |> Errs.raise_if_error | `Directory, true -> File_manager.create_rw ~overwrite:true config |> Errs.raise_if_error | `Directory, false -> File_manager.open_rw config |> Errs.raise_if_error | (`File | `Other), _ -> Errs.raise_error (`Not_a_directory root) in let dict = Dict.v fm |> Errs.raise_if_error in let dispatcher = Dispatcher.v fm |> Errs.raise_if_error in let lru = Lru.create config in let contents = Contents.CA.v ~config ~fm ~dict ~dispatcher ~lru in let node = Node.CA.v ~config ~fm ~dict ~dispatcher ~lru in let commit = Commit.CA.v ~config ~fm ~dict ~dispatcher ~lru in let+ branch = let root = Conf.root config in let fresh = Conf.fresh config in let readonly = Conf.readonly config in let path = Irmin_pack.Layout.V4.branch ~root in Branch.v ~fresh ~readonly path in let during_batch = false in let running_gc = None in { config; contents; node; commit; branch; fm; dict; during_batch; running_gc; dispatcher; lru; } let flush t = File_manager.flush ?hook:None t.fm |> Errs.raise_if_error let fsync t = File_manager.fsync t.fm |> Errs.raise_if_error let reload t = File_manager.reload t.fm |> Errs.raise_if_error module Gc = struct let is_allowed { fm; _ } = File_manager.gc_allowed fm let behaviour { fm; _ } = File_manager.gc_behaviour fm let cancel t = match t.running_gc with | Some { gc; _ } -> let cancelled = Gc.cancel gc in t.running_gc <- None; cancelled | None -> false let direct_commit_key t key = let state : _ Pack_key.state = Pack_key.inspect key in match state with | Direct _ -> Ok key | Indexed h -> ( match Commit.CA.index_direct_with_kind t.commit h with | None -> Error (`Commit_key_is_dangling (Irmin.Type.to_string XKey.t key)) | Some (k, _kind) -> Ok k) let start ~unlink ~use_auto_finalisation ~output t commit_key = let open Result_syntax in [%log.info "GC: Starting on %a" pp_key commit_key]; let* () = if t.during_batch then Error `Gc_forbidden_during_batch else Ok () in let* commit_key = direct_commit_key t commit_key in let root = Conf.root t.config in let* () = if not (is_allowed t) then Error (`Gc_disallowed "Store does not support GC") else Ok () in let current_generation = File_manager.generation t.fm in let next_generation = current_generation + 1 in let lower_root = Conf.lower_root t.config in let* gc = Gc.v ~root ~lower_root ~generation:next_generation ~unlink ~dispatcher:t.dispatcher ~fm:t.fm ~contents:t.contents ~node:t.node ~commit:t.commit ~output commit_key in t.running_gc <- Some { gc; use_auto_finalisation }; Ok () let start_exn ?(unlink = true) ?(output = `Root) ~use_auto_finalisation t commit_key = match t.running_gc with | Some _ -> [%log.info "Repo is alreadying running GC. Skipping."]; Lwt.return false | None -> ( let result = start ~unlink ~use_auto_finalisation ~output t commit_key in match result with | Ok _ -> Lwt.return true | Error e -> Errs.raise_error e) let finalise_exn ?(wait = false) t = let* result = match t.running_gc with | None -> Lwt.return_ok `Idle | Some { gc; _ } -> if t.during_batch then Lwt.return_error `Gc_forbidden_during_batch else Gc.finalise ~wait gc in match result with | Ok (`Finalised _ as x) -> t.running_gc <- None; Lwt.return x | Ok waited -> Lwt.return waited | Error e -> t.running_gc <- None; Errs.raise_error e let is_finished t = Option.is_none t.running_gc let on_finalise t f = match t.running_gc with | None -> () | Some { gc; _ } -> Gc.on_finalise gc f let try_auto_finalise_exn t = match t.running_gc with | None | Some { use_auto_finalisation = false; _ } -> Lwt.return_unit | Some { use_auto_finalisation = true; _ } -> let* _ = finalise_exn ~wait:false t in Lwt.return_unit let latest_gc_target t = let pl = File_manager.(Control.payload (control t.fm)) in match pl.status with | From_v1_v2_post_upgrade _ | Used_non_minimal_indexing_strategy | No_gc_yet -> None | T1 | T2 | T3 | T4 | T5 | T6 | T7 | T8 | T9 | T10 | T11 | T12 | T13 | T14 | T15 -> assert false | Gced { latest_gc_target_offset = offset; _ } when offset = Int63.zero -> None | Gced { latest_gc_target_offset = offset; _ } -> ( let entry = Commit.CA.read_and_decode_entry_prefix ~off:offset t.dispatcher in match Commit.CA.Entry_prefix.total_entry_length entry with | None -> (* Commits on which this operation is supported have a length in their header. *) assert false | Some length -> let key = Pack_key.v_direct ~offset ~length entry.hash in Some key) let create_one_commit_store t commit_key path = let () = match Io.classify_path path with | `Directory -> () | `No_such_file_or_directory -> Io.mkdir path |> Errs.raise_if_error | _ -> Errs.raise_error `Invalid_layout in let commit_key = direct_commit_key t commit_key |> Errs.raise_if_error in (* The GC action here does not matter, since we'll not fully finalise it *) let* launched = start_exn ~use_auto_finalisation:false ~output:(`External path) t commit_key in let () = if not launched then Errs.raise_error `Forbidden_during_gc in let* gced = match t.running_gc with | None -> assert false | Some { gc; _ } -> Gc.finalise_without_swap gc in let config = Irmin.Backend.Conf.add t.config Conf.Key.root path in let () = File_manager.create_one_commit_store t.fm config gced commit_key |> Errs.raise_if_error in let branch_path = Irmin_pack.Layout.V4.branch ~root:path in let* branch_store = Branch.v ~fresh:true ~readonly:false branch_path in let* () = Branch.close branch_store in Lwt.return_unit end let is_split_allowed = Gc.is_allowed let split t = let open Result_syntax in let readonly = Irmin_pack.Conf.readonly t.config in let* () = if not (is_split_allowed t) then Error `Split_disallowed else Ok () in let* () = if readonly then Error `Ro_not_allowed else Ok () in let* () = if t.during_batch then Error `Split_forbidden_during_batch else Ok () in File_manager.split t.fm let split_exn repo = split repo |> Errs.raise_if_error let add_volume_exn t = let () = if Irmin_pack.Conf.readonly t.config then Errs.raise_error `Ro_not_allowed; if Gc.is_finished t = false then Errs.raise_error `Add_volume_forbidden_during_gc in File_manager.add_volume t.fm |> Errs.raise_if_error let batch t f = [%log.debug "[pack] batch start"]; let readonly = Irmin_pack.Conf.readonly t.config in if readonly then Errs.raise_error `Ro_not_allowed else let c0 = Mtime_clock.counter () in let try_finalise () = Gc.try_auto_finalise_exn t in let* _ = try_finalise () in t.during_batch <- true; let contents = Contents.CA.cast t.contents in let node = Node.CA.Pack.cast t.node in let commit = Commit.CA.cast t.commit in let contents : 'a Contents.t = contents in let node : 'a Node.t = (contents, node) in let commit : 'a Commit.t = (node, commit) in let on_success res = let s = Mtime_clock.count c0 |> Mtime.span_to_s in [%log.info "[pack] batch completed in %.6fs" s]; t.during_batch <- false; File_manager.flush t.fm |> Errs.raise_if_error; let* _ = try_finalise () in Lwt.return res in let on_fail exn = t.during_batch <- false; [%log.info "[pack] batch failed. calling flush. (%s)" (Printexc.to_string exn)]; let () = match File_manager.flush t.fm with | Ok () -> () | Error err -> [%log.err "[pack] batch failed and flush failed. Silencing flush \ fail. (%a)" (Irmin.Type.pp Errs.t) err] in (* Kill gc process in at_exit. *) raise exn in Lwt.try_bind (fun () -> f contents node commit) on_success on_fail let close t = (* Step 1 - Kill the gc process if it is running *) let _ = Gc.cancel t in (* Step 2 - Close the files *) let () = File_manager.close t.fm |> Errs.raise_if_error in Branch.close t.branch >>= fun () -> (* Step 3 - Close the in-memory abstractions *) Dict.close t.dict; Contents.CA.close (contents_t t) >>= fun () -> Node.CA.close (snd (node_t t)) >>= fun () -> Commit.CA.close (snd (commit_t t)) end end include Irmin.Of_backend (X) module Integrity_checks = Checks.Integrity_checks (XKey) (X) (Index) let integrity_check_inodes ?heads t = let* heads = match heads with None -> Repo.heads t | Some m -> Lwt.return m in let hashes = List.map (fun x -> `Commit (Commit.key x)) heads in let iter ~pred_node ~node ~commit t = Repo.iter ~cache_size:1_000_000 ~min:[] ~max:hashes ~pred_node ~node ~commit t in let nodes = X.Repo.node_t t |> snd in let check = X.Node.CA.integrity_check_inodes nodes in let pred = Repo.default_pred_node in Integrity_checks.check_inodes ~iter ~pred ~check t let integrity_check_always ?ppf ~auto_repair t = let contents = X.Repo.contents_t t in let nodes = X.Repo.node_t t |> snd in let commits = X.Repo.commit_t t |> snd in let check ~kind ~offset ~length k = match kind with | `Contents -> X.Contents.CA.integrity_check ~offset ~length k contents | `Node -> X.Node.CA.integrity_check ~offset ~length k nodes | `Commit -> X.Commit.CA.integrity_check ~offset ~length k commits in let index = File_manager.index t.fm in Integrity_checks.check_always ?ppf ~auto_repair ~check index let integrity_check_minimal ?ppf ?heads t = let* heads = match heads with None -> Repo.heads t | Some m -> Lwt.return m in let hashes = List.map (fun x -> `Commit (Commit.key x)) heads in let iter ~contents ~node ~pred_node ~pred_commit repo = Repo.iter ~cache_size:1_000_000 ~min:[] ~max:hashes ~contents ~node ~pred_node ~pred_commit repo in let contents = X.Repo.contents_t t in let pred = X.Node.CA.Val.pred in let recompute_hash = X.Node.CA.Val.recompute_hash in let check ~offset ~length k = X.Contents.CA.integrity_check ~offset ~length k contents in Integrity_checks.check_minimal ?ppf ~pred ~iter ~check ~recompute_hash t let integrity_check ?ppf ?heads ~auto_repair t = let is_minimal = t.X.Repo.config |> Conf.indexing_strategy |> Irmin_pack.Indexing_strategy.is_minimal in let result = if is_minimal then integrity_check_minimal ?ppf ?heads t else integrity_check_always ?ppf ~auto_repair t |> Lwt.return in result module Stats_computation = struct let pp_key = Irmin.Type.pp XKey.t let traverse_inodes ~dump_blob_paths_to commit repo = let module Stats = Checks.Stats (struct type nonrec step = step let step_t = step_t module Hash = Hash end) in let t = Stats.v () in let pred_node repo k = X.Node.find (X.Repo.node_t repo) k >|= function | None -> Fmt.failwith "key %a not found" pp_key k | Some v -> let width = X.Node.Val.length v in let nb_children = X.Node.CA.Val.nb_children v in let preds = X.Node.CA.Val.pred v in let () = preds |> List.map (function | s, `Contents h -> (s, `Contents (XKey.to_hash h)) | s, `Inode h -> (s, `Inode (XKey.to_hash h)) | s, `Node h -> (s, `Node (XKey.to_hash h))) |> Stats.visit_node t (XKey.to_hash k) ~width ~nb_children in List.rev_map (function | s, `Inode x -> assert (s = None); `Node x | _, `Node x -> `Node x | _, `Contents x -> `Contents x) preds in (* We are traversing only one commit. *) let pred_commit repo k = X.Commit.find (X.Repo.commit_t repo) k >|= function | None -> [] | Some c -> let node = X.Commit.Val.node c in Stats.visit_commit t (XKey.to_hash node); [ `Node node ] in let pred_contents _repo k = Stats.visit_contents t (XKey.to_hash k); Lwt.return [] in (* We want to discover all paths to a node, so we don't cache nodes during traversal. *) let* () = Repo.breadth_first_traversal ~cache_size:0 ~pred_node ~pred_commit ~pred_contents ~max:[ commit ] repo in Stats.pp_results ~dump_blob_paths_to t; Lwt.return_unit let run ~dump_blob_paths_to ~commit repo = Printexc.record_backtrace true; let key = `Commit (Commit.key commit) in traverse_inodes ~dump_blob_paths_to key repo end let stats = Stats_computation.run let reload = X.Repo.reload let flush = X.Repo.flush let fsync = X.Repo.fsync let is_split_allowed = X.Repo.is_split_allowed let split = X.Repo.split_exn let add_volume = X.Repo.add_volume_exn let create_one_commit_store = X.Repo.Gc.create_one_commit_store module Gc = struct type msg = [ `Msg of string ] type process_state = [ `Idle | `Running | `Finalised of Stats.Latest_gc.stats ] let catch_errors context error = let err = match error with | Errors.Pack_error error -> Fmt.str "Pack_error: %a" Errors.pp_base_error error | Irmin.Closed -> "Irmin.Closed" | Irmin_pack.RO_not_allowed -> "Irmin_pack.RO_not_allowed" | Unix.Unix_error (err, s1, s2) -> let pp = Irmin.Type.pp Io.misc_error_t in Fmt.str "Unix_error: %a" pp (err, s1, s2) | exn -> raise exn in let error_msg = Fmt.str "[%s] resulted in error: %s" context err in Lwt.return_error (`Msg error_msg) let map_errors context (error : Errs.t) = let err_msg = Fmt.str "[%s] resulted in error: %a" context (Irmin.Type.pp Errs.t) error in `Msg err_msg let finalise_exn = X.Repo.Gc.finalise_exn let start_exn ?unlink t = X.Repo.Gc.start_exn ?unlink ~use_auto_finalisation:false t let start repo commit_key = try let* started = X.Repo.Gc.start_exn ~unlink:true ~use_auto_finalisation:true repo commit_key in Lwt.return_ok started with exn -> catch_errors "Start GC" exn let is_finished = X.Repo.Gc.is_finished let behaviour = X.Repo.Gc.behaviour let wait repo = try let* result = finalise_exn ~wait:true repo in match result with | `Running -> assert false (* [~wait:true] should never return [Running] *) | `Idle -> Lwt.return_ok None | `Finalised stats -> Lwt.return_ok @@ Some stats with exn -> catch_errors "Wait for GC" exn let run ?(finished = fun _ -> Lwt.return_unit) repo commit_key = let* started = start repo commit_key in match started with | Ok r -> if r then X.Repo.Gc.on_finalise repo (fun finalisation_r -> match finalisation_r with | Ok _ as stats -> finished stats | Error err -> let err_msg = map_errors "Finalise GC" err in finished @@ Error err_msg); Lwt.return_ok r | Error _ as e -> Lwt.return e let is_allowed = X.Repo.Gc.is_allowed let cancel repo = X.Repo.Gc.cancel repo let latest_gc_target = X.Repo.Gc.latest_gc_target end module Traverse_pack_file = Traverse_pack_file.Make (struct module File_manager = File_manager module Dispatcher = Dispatcher module Hash = H module Index = Index module Inode = X.Node.CA module Dict = Dict module Contents = X.Contents.Pack_value module Commit = X.Commit.Pack_value end) let traverse_pack_file = Traverse_pack_file.run let test_traverse_pack_file = Traverse_pack_file.test module Snapshot = struct include X.Node.CA.Snapshot type t = Inode of inode | Blob of Backend.Contents.Val.t [@@deriving irmin] module S = Snapshot.Make (struct module Hash = H module Inode = X.Node.CA module Contents_pack = X.Contents.CA module Fm = File_manager module Dispatcher = Dispatcher end) include S module Export = struct let iter ?on_disk repo f ~root_key = [%log.debug "Iterate over a tree"]; let contents = X.Repo.contents_t repo in let nodes = X.Repo.node_t repo |> snd in let export = S.Export.v repo.config contents nodes in let f_contents x = f (Blob x) in let f_nodes x = f (Inode x) in match root_key with | `Contents _ -> Fmt.failwith "[root_key] cannot be of type contents" | `Node key -> let* total = Export.run ?on_disk export f_contents f_nodes (key, Pack_value.Kind.Inode_v2_root) in Export.close export |> Errs.raise_if_error; Lwt.return total end let export = Export.iter module Import = struct type process = Import.t let v ?on_disk repo = let contents = X.Repo.contents_t repo in let nodes = X.Repo.node_t repo |> snd in let log_size = Conf.index_log_size repo.config in Import.v ?on_disk log_size contents nodes let save_elt process elt = match elt with | Blob x -> Import.save_contents process x | Inode x -> Import.save_inodes process x let close process repo = flush repo; fsync repo; Import.close process end end module Internal = struct module Io = Io module Errs = Errs module Index = Index module File_manager = File_manager let file_manager (repo : X.Repo.t) = repo.fm module Dict = Dict let dict (repo : X.Repo.t) = repo.dict module Dispatcher = Dispatcher let dispatcher (repo : X.Repo.t) = repo.dispatcher module XKey = XKey let suffix_commit_mem repo key = X.Commit.CA.unsafe_find ~check_integrity:false (snd (X.Repo.commit_t repo)) key |> Option.is_some let suffix_node_mem repo key = X.Node.CA.unsafe_find ~check_integrity:false (snd (X.Repo.node_t repo)) key |> Option.is_some let suffix_contents_mem repo key = X.Contents.CA.unsafe_find ~check_integrity:false (X.Repo.contents_t repo) key |> Option.is_some let kill_gc (repo : X.Repo.t) = match (repo.running_gc : X.Repo.running_gc option) with | None -> false | Some { gc; _ } -> ( try X.Gc.cancel gc with Unix.Unix_error (Unix.ESRCH, "kill", _) -> false) end end end
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