package biocaml
The OCaml Bioinformatics Library
Install
Dune Dependency
Authors
Maintainers
Sources
biocaml-0.11.2.tbz
sha256=fae219e66db06f81f3fd7d9e44717ccf2d6d85701adb12004ab4ae6d3359dd2d
sha512=f6abd60dac2e02777be81ce3b5acdc0db23b3fa06731f5b2d0b32e6ecc9305fe64f407bbd95a3a9488b14d0a7ac7c41c73a7e18c329a8f18febfc8fd50eccbc6
doc/src/biocaml.unix/seq_range.ml.html
Source file seq_range.ml
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module type Identifier = sig include Comparable include Sexpable with type t := t val to_string : t -> string end module Make(S : Identifier) = struct type t = S.t * Range.t [@@deriving compare, sexp] let make s lo hi = let open Or_error in Range.make lo hi >>= fun r -> Or_error.return (s, r) let seq = fst let size (_, r) = Range.size r let to_string (seq, { Range.lo ; hi }) = sprintf "%s:%d-%d" (S.to_string seq) lo hi end include Make(String) let of_string s = try Scanf.sscanf s "%s@:%d-%d" make with Scanf.Scan_failure _ -> Or_error.errorf "Seq_range.of_string: invalid format %s" s
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