package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

github.com Readme Edit opam file Versions (5)

Authors

Maintainers

P

philippe.veber@gmail.com

Sources

biocaml-0.11.2.tbz

sha256=fae219e66db06f81f3fd7d9e44717ccf2d6d85701adb12004ab4ae6d3359dd2d

sha512=f6abd60dac2e02777be81ce3b5acdc0db23b3fa06731f5b2d0b32e6ecc9305fe64f407bbd95a3a9488b14d0a7ac7c41c73a7e18c329a8f18febfc8fd50eccbc6

doc/biocaml.unix/Biocaml_unix/Strand/index.html

Module `Biocaml_unix.Strand`Source

Strand names. There are various conventions for referring to the two strands of DNA. This module provides an of_string function that parses the various conventions into a canonical representation, which we define to be '-' or '+'.

Sourcetype t = private char

Only valid values are '-' or '+'.

Sourceval minus : t

Sourceval plus : t

Sourceval of_string : string -> t Core.Or_error.t

Convert string to strand name if possible.

Sourceval minus_plus : t -> char

Return '-' or '+'.

Sourceval rev_fwd : t -> string

Return "rev" or "fwd".