package biocaml

You can search for identifiers within the package.

in-package search v0.2.0

The OCaml Bioinformatics Library

Install

sha256=fae219e66db06f81f3fd7d9e44717ccf2d6d85701adb12004ab4ae6d3359dd2d

sha512=f6abd60dac2e02777be81ce3b5acdc0db23b3fa06731f5b2d0b32e6ecc9305fe64f407bbd95a3a9488b14d0a7ac7c41c73a7e18c329a8f18febfc8fd50eccbc6

Sourcetype t = private int

Flags are represented as a "bit map".

include Sexplib0.Sexpable.S with type t := t

Sourceval t_of_sexp : Sexplib0.Sexp.t -> t

Sourceval sexp_of_t : t -> Sexplib0.Sexp.t

Sourceval of_int : int -> t Core.Or_error.t

Sourceval has_multiple_segments : t -> bool

Sourceval each_segment_properly_aligned : t -> bool

Sourceval segment_unmapped : t -> bool

Sourceval next_segment_unmapped : t -> bool

Sourceval seq_is_reverse_complemented : t -> bool

Sourceval next_seq_is_reverse_complemented : t -> bool

Sourceval first_segment : t -> bool

Sourceval last_segment : t -> bool

Sourceval secondary_alignment : t -> bool

Sourceval not_passing_quality_controls : t -> bool

Sourceval pcr_or_optical_duplicate : t -> bool

Sourceval supplementary_alignment : t -> bool

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