package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

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biocaml@googlegroups.com

Sources

v0.11.1.tar.gz

md5=e292efa2f61fec33dad63ec897106f59

sha512=35519bf3b1e67a9191ef9bb74eba0dae941e0d05bad89076a36f507dc5c2d105a03c1c917d5a3f7ed9d1da4acbf3199582f78c308aa2a5a22c21f743945c852b

doc/biocaml.unix/Biocaml_unix/Strand/index.html

Module `Biocaml_unix.Strand`Source

Strand names. There are various conventions for referring to the two strands of DNA. This module provides an of_string function that parses the various conventions into a canonical representation, which we define to be '-' or '+'.

Sourcetype t = private char

Only valid values are '-' or '+'.

Sourceval minus : t

Sourceval plus : t

Sourceval of_string : string -> t Core_kernel.Or_error.t

Convert string to strand name if possible.

Sourceval minus_plus : t -> char

Return '-' or '+'.

Sourceval rev_fwd : t -> string

Return "rev" or "fwd".