package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

  1. S
    Sebastien Mondet
  2. A
    Ashish Agarwal
  3. P
    Philippe Veber
  4. C
    Christophe Troestler
  5. S
    Sergei Lebedev
  6. D
    David Koppstein
  7. A
    Alexander Gryzlov
  8. F
    Francois Berenger

Maintainers

  1. B
    biocaml@googlegroups.com

Sources

v0.11.0.tar.gz
md5=486aeb3e552dabae85839e2af30d6c52
sha512=4ed2df0b7cbd80bd6e29bd8fee9d2dacd9379ad0f4ff142bd8e16ade3f1507f6cc7cbe4c614943b8feb8fa4705935695cb458606b0da813dbf255b1e566a43cf

doc/biocaml.unix/Biocaml_unix/Seq_range/Make/argument-1-S/Map/index.html

Module S.Map

module Key : sig ... end
type 'a t = (Key.t, 'a, Key.comparator_witness) Core__Map_intf.Map.t
val compare : 'a Base__Ppx_compare_lib.compare -> 'a t Base__Ppx_compare_lib.compare
val empty : 'a t
val singleton : Key.t -> 'a -> 'a t
val map_keys : 'v t -> f:(Key.t -> Key.t) -> [ `Duplicate_key of Key.t | `Ok of 'v t ]
val map_keys_exn : 'v t -> f:(Key.t -> Key.t) -> 'v t
val of_alist : (Key.t * 'a) list -> [ `Duplicate_key of Key.t | `Ok of 'a t ]
val of_alist_or_error : (Key.t * 'a) list -> 'a t Base__.Or_error.t
val of_alist_exn : (Key.t * 'a) list -> 'a t
val of_alist_multi : (Key.t * 'a) list -> 'a list t
val of_alist_fold : (Key.t * 'a) list -> init:'b -> f:('b -> 'a -> 'b) -> 'b t
val of_alist_reduce : (Key.t * 'a) list -> f:('a -> 'a -> 'a) -> 'a t
val of_sorted_array : (Key.t * 'a) array -> 'a t Base__.Or_error.t
val of_sorted_array_unchecked : (Key.t * 'a) array -> 'a t
val of_increasing_iterator_unchecked : len:int -> f:(int -> Key.t * 'a) -> 'a t
val of_increasing_sequence : (Key.t * 'a) Base__.Sequence.t -> 'a t Base__.Or_error.t
val of_sequence : (Key.t * 'a) Base__.Sequence.t -> [ `Duplicate_key of Key.t | `Ok of 'a t ]
val of_sequence_or_error : (Key.t * 'a) Base__.Sequence.t -> 'a t Base__.Or_error.t
val of_sequence_exn : (Key.t * 'a) Base__.Sequence.t -> 'a t
val of_sequence_multi : (Key.t * 'a) Base__.Sequence.t -> 'a list t
val of_sequence_fold : (Key.t * 'a) Base__.Sequence.t -> init:'b -> f:('b -> 'a -> 'b) -> 'b t
val of_sequence_reduce : (Key.t * 'a) Base__.Sequence.t -> f:('a -> 'a -> 'a) -> 'a t
val of_iteri : iteri:(f:(key:Key.t -> data:'v -> unit) -> unit) -> [ `Duplicate_key of Key.t | `Ok of 'v t ]
val of_iteri_exn : iteri:(f:(key:Key.t -> data:'v -> unit) -> unit) -> 'v t
val of_tree : (Key.t, 'a, Key.comparator_witness) Core__Map_intf.Tree.t -> 'a t
val of_hashtbl_exn : (Key.t, 'a) Core__.Hashtbl.t -> 'a t
val of_key_set : (Key.t, Key.comparator_witness) Base.Set.t -> f:(Key.t -> 'v) -> 'v t
val quickcheck_generator : Key.t Core__.Quickcheck.Generator.t -> 'a Core__.Quickcheck.Generator.t -> 'a t Core__.Quickcheck.Generator.t
val invariants : 'a t -> bool
val is_empty : 'a t -> bool
val length : 'a t -> int
val add : 'a t -> key:Key.t -> data:'a -> 'a t Base__Map_intf.Or_duplicate.t
val add_exn : 'a t -> key:Key.t -> data:'a -> 'a t
val set : 'a t -> key:Key.t -> data:'a -> 'a t
val add_multi : 'a list t -> key:Key.t -> data:'a -> 'a list t
val remove_multi : 'a list t -> Key.t -> 'a list t
val find_multi : 'a list t -> Key.t -> 'a list
val change : 'a t -> Key.t -> f:('a option -> 'a option) -> 'a t
val update : 'a t -> Key.t -> f:('a option -> 'a) -> 'a t
val find : 'a t -> Key.t -> 'a option
val find_exn : 'a t -> Key.t -> 'a
val remove : 'a t -> Key.t -> 'a t
val mem : 'a t -> Key.t -> bool
val iter_keys : 'a t -> f:(Key.t -> unit) -> unit
val iter : 'a t -> f:('a -> unit) -> unit
val iteri : 'a t -> f:(key:Key.t -> data:'a -> unit) -> unit
val iteri_until : 'a t -> f:(key:Key.t -> data:'a -> Base__Map_intf.Continue_or_stop.t) -> Base__Map_intf.Finished_or_unfinished.t
val iter2 : 'a t -> 'b t -> f:(key:Key.t -> data:('a, 'b) Base__Map_intf.Merge_element.t -> unit) -> unit
val map : 'a t -> f:('a -> 'b) -> 'b t
val mapi : 'a t -> f:(key:Key.t -> data:'a -> 'b) -> 'b t
val fold : 'a t -> init:'b -> f:(key:Key.t -> data:'a -> 'b -> 'b) -> 'b
val fold_until : 'a t -> init:'acc -> f: (key:Key.t -> data:'a -> 'acc -> ('acc, 'final) Base__.Container.Continue_or_stop.t) -> finish:('acc -> 'final) -> 'final
val fold_right : 'a t -> init:'b -> f:(key:Key.t -> data:'a -> 'b -> 'b) -> 'b
val fold2 : 'a t -> 'b t -> init:'c -> f:(key:Key.t -> data:('a, 'b) Base__Map_intf.Merge_element.t -> 'c -> 'c) -> 'c
val filter_keys : 'a t -> f:(Key.t -> bool) -> 'a t
val filter : 'a t -> f:('a -> bool) -> 'a t
val filteri : 'a t -> f:(key:Key.t -> data:'a -> bool) -> 'a t
val filter_map : 'a t -> f:('a -> 'b option) -> 'b t
val filter_mapi : 'a t -> f:(key:Key.t -> data:'a -> 'b option) -> 'b t
val partition_mapi : 'a t -> f:(key:Key.t -> data:'a -> ('b, 'c) Base__.Either.t) -> 'b t * 'c t
val partition_map : 'a t -> f:('a -> ('b, 'c) Base__.Either.t) -> 'b t * 'c t
val partitioni_tf : 'a t -> f:(key:Key.t -> data:'a -> bool) -> 'a t * 'a t
val partition_tf : 'a t -> f:('a -> bool) -> 'a t * 'a t
val combine_errors : 'a Base__.Or_error.t t -> 'a t Base__.Or_error.t
val compare_direct : ('a -> 'a -> int) -> 'a t -> 'a t -> int
val equal : ('a -> 'a -> bool) -> 'a t -> 'a t -> bool
val keys : 'a t -> Key.t list
val data : 'a t -> 'a list
val to_alist : ?key_order:[ `Decreasing | `Increasing ] -> 'a t -> (Key.t * 'a) list
val merge : 'a t -> 'b t -> f:(key:Key.t -> ('a, 'b) Base__Map_intf.Merge_element.t -> 'c option) -> 'c t
val merge_skewed : 'v t -> 'v t -> combine:(key:Key.t -> 'v -> 'v -> 'v) -> 'v t
val symmetric_diff : 'a t -> 'a t -> data_equal:('a -> 'a -> bool) -> (Key.t, 'a) Base__Map_intf.Symmetric_diff_element.t Base__.Sequence.t
val fold_symmetric_diff : 'a t -> 'a t -> data_equal:('a -> 'a -> bool) -> init:'c -> f:('c -> (Key.t, 'a) Base__Map_intf.Symmetric_diff_element.t -> 'c) -> 'c
val min_elt : 'a t -> (Key.t * 'a) option
val min_elt_exn : 'a t -> Key.t * 'a
val max_elt : 'a t -> (Key.t * 'a) option
val max_elt_exn : 'a t -> Key.t * 'a
val for_all : 'a t -> f:('a -> bool) -> bool
val for_alli : 'a t -> f:(key:Key.t -> data:'a -> bool) -> bool
val exists : 'a t -> f:('a -> bool) -> bool
val existsi : 'a t -> f:(key:Key.t -> data:'a -> bool) -> bool
val count : 'a t -> f:('a -> bool) -> int
val counti : 'a t -> f:(key:Key.t -> data:'a -> bool) -> int
val split : 'a t -> Key.t -> 'a t * (Key.t * 'a) option * 'a t
val append : lower_part:'a t -> upper_part:'a t -> [ `Ok of 'a t | `Overlapping_key_ranges ]
val subrange : 'a t -> lower_bound:Key.t Base__.Maybe_bound.t -> upper_bound:Key.t Base__.Maybe_bound.t -> 'a t
val fold_range_inclusive : 'a t -> min:Key.t -> max:Key.t -> init:'b -> f:(key:Key.t -> data:'a -> 'b -> 'b) -> 'b
val range_to_alist : 'a t -> min:Key.t -> max:Key.t -> (Key.t * 'a) list
val closest_key : 'a t -> [ `Greater_or_equal_to | `Greater_than | `Less_or_equal_to | `Less_than ] -> Key.t -> (Key.t * 'a) option
val nth : 'a t -> int -> (Key.t * 'a) option
val nth_exn : 'a t -> int -> Key.t * 'a
val rank : 'a t -> Key.t -> int option
val to_tree : 'a t -> (Key.t, 'a, Key.comparator_witness) Core__Map_intf.Tree.t
val to_sequence : ?order:[ `Decreasing_key | `Increasing_key ] -> ?keys_greater_or_equal_to:Key.t -> ?keys_less_or_equal_to:Key.t -> 'a t -> (Key.t * 'a) Base__.Sequence.t
val binary_search_segmented : 'a t -> segment_of:(key:Key.t -> data:'a -> [ `Left | `Right ]) -> Base__.Binary_searchable.Which_target_by_segment.t -> (Key.t * 'a) option
val binary_search_subrange : 'a t -> compare:(key:Key.t -> data:'a -> 'bound -> int) -> lower_bound:'bound Base__.Maybe_bound.t -> upper_bound:'bound Base__.Maybe_bound.t -> 'a t
val key_set : 'a t -> (Key.t, Key.comparator_witness) Base.Set.t
val validate : name:(Key.t -> Core__.Import.string) -> 'a Validate.check -> 'a t Validate.check
val validatei : name:(Key.t -> Core__.Import.string) -> (Key.t * 'a) Validate.check -> 'a t Validate.check
val quickcheck_observer : Key.t Core__.Quickcheck.Observer.t -> 'v Core__.Quickcheck.Observer.t -> 'v t Core__.Quickcheck.Observer.t
val quickcheck_shrinker : Key.t Core__.Quickcheck.Shrinker.t -> 'v Core__.Quickcheck.Shrinker.t -> 'v t Core__.Quickcheck.Shrinker.t
module Provide_of_sexp (Key : sig ... end) : sig ... end
module Provide_bin_io (Key : sig ... end) : sig ... end
module Provide_hash (Key : sig ... end) : sig ... end
val t_of_sexp : (Sexplib0.Sexp.t -> 'a) -> Sexplib0.Sexp.t -> 'a t
val sexp_of_t : ('a -> Sexplib0.Sexp.t) -> 'a t -> Sexplib0.Sexp.t
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