package biocaml

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in-package search v0.2.0

The OCaml Bioinformatics Library

Install

md5=486aeb3e552dabae85839e2af30d6c52

sha512=4ed2df0b7cbd80bd6e29bd8fee9d2dacd9379ad0f4ff142bd8e16ade3f1507f6cc7cbe4c614943b8feb8fa4705935695cb458606b0da813dbf255b1e566a43cf

Efficient integer sets when many elements expected to be large contiguous sequences of integers.

Sourcetype t

Type of a set of integers.

Sourcetype range = Range.t

Sourceval empty : t

The empty set.

Sourceval of_range_list : (int * int) list -> t

Construct the set of integers representing the union of integers in all given ranges.

Sourceval to_range_list : t -> (int * int) list

Return set of integers as a minimal list of non-overlapping ranges in ascending order by their coordinates.

Sourceval to_list : t -> int list

Return set of integers as a list. Elements will be in ascending order.

Sourceval size : t -> int

Number of elements in set.

Sourceval is_empty : t -> bool

Return true if given set is empty.

Sourceval inter : t -> t -> t

Set intersection.

Sourceval union : t -> t -> t

Set union.

Sourceval diff : t -> t -> t

Set difference. diff s t is the set of elements that are in s but not in t.

Sourceval subset : t -> t -> bool

subset s t returns true if s is a subset of t.