package biocaml

You can search for identifiers within the package.

in-package search v0.2.0

The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

Maintainers

B

biocaml@googlegroups.com

Sources

v0.11.0.tar.gz

md5=486aeb3e552dabae85839e2af30d6c52

sha512=4ed2df0b7cbd80bd6e29bd8fee9d2dacd9379ad0f4ff142bd8e16ade3f1507f6cc7cbe4c614943b8feb8fa4705935695cb458606b0da813dbf255b1e566a43cf

doc/biocaml.base/Biocaml_base/Fasta/Parser0/index.html

Module `Fasta.Parser0`Source

Low-level parsing

This module provides a function that can be used to convert a stream of strings (representing consecutive chunks of a FASTA file) into a valid sequence of low-level items (items0). This representation is especially relevant to deal with very long sequences (like chromosome) in constant memory.

Sourcetype state

Sourceval initial_state : ?fmt:fmt -> Base.unit -> state

Source

val step : 
  state ->
  Base.string Base.option ->
  (state * item0 Base.list, [> parser_error ]) Base.Result.t