package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

Maintainers

B

biocaml@googlegroups.com

Sources

v0.10.0.tar.gz

md5=497e3f2f7128a6ca347d66848da38a3d

sha512=4a76ebbafda3bc944afaff40d69791dfe153a0638ef5d7e6e1bc962b7f991d9545cd0af2d7930b39f8b31dbf067d0603cfa03d9b7a49396ab1ae452df47fd1f3

doc/biocaml.unix/Biocaml_unix/Table/Row/index.html

Module `Table.Row`

Definition of rows

type item = [

| `int of int
| `float of float
| `string of string

]

Type row elements (or “cells”).

type t = item array

A single row.

type item_type = [

| `type_int
| `type_float
| `type_string

]

Definition of the type of a cell.

type t_type = item_type array

Definition of the type of a row.

Tags

module Tags : sig ... end

Tags describe the actual format of the row stream. See also Tags.t.

module Error : sig ... end

val of_line : 
  ?separators:char list ->
  ?strict_row_length:bool ->
  ?strict_cell_type:bool ->
  ?format:t_type ->
  Line.t ->
  (t, [> Error.line_parsing ]) Core_kernel.Result.t

Parse a Line.t into a row while specifying a format.

If format is None (the default), then all the elements are put in `string _ rows.
The default cell separators are [' '; '\t'].
If strict_row_length is true and format provided, then check that the number of columns is at least the one of the format.
If strict_cell_type is true and format provided, then check that each cell has the exactly right format.

val to_line : sep:string -> t -> Line.t

Write the row to a Line.t.

`Transform.t` Creations

module Transform : sig ... end

S-Expressions

val item_of_sexp : Sexplib.Sexp.t -> item

val sexp_of_item : item -> Sexplib.Sexp.t

val t_of_sexp : Sexplib.Sexp.t -> t

val sexp_of_t : t -> Sexplib.Sexp.t

val item_type_of_sexp : Sexplib.Sexp.t -> item_type

val sexp_of_item_type : item_type -> Sexplib.Sexp.t

val t_type_of_sexp : Sexplib.Sexp.t -> t_type

val sexp_of_t_type : t_type -> Sexplib.Sexp.t

On This Page

Tags
Transform.t Creations
S-Expressions