package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

Maintainers

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biocaml@googlegroups.com

Sources

v0.10.0.tar.gz

md5=497e3f2f7128a6ca347d66848da38a3d

sha512=4a76ebbafda3bc944afaff40d69791dfe153a0638ef5d7e6e1bc962b7f991d9545cd0af2d7930b39f8b31dbf067d0603cfa03d9b7a49396ab1ae452df47fd1f3

doc/biocaml.unix/Biocaml_unix/Strand/index.html

Module `Biocaml_unix.Strand`

Strand names. There are various conventions for referring to the two strands of DNA. This module provides an of_string function that parses the various conventions into a canonical representation, which we define to be '-' or '+'.

type t = private char

Only valid values are '-' or '+'.

val minus : t

val plus : t

val of_string : string -> t Core_kernel.Or_error.t

Convert string to strand name if possible.

val minus_plus : t -> char

Return '-' or '+'.

val rev_fwd : t -> string

Return "rev" or "fwd".