package biocaml

You can search for identifiers within the package.

in-package search v0.2.0

The OCaml Bioinformatics Library

Install

md5=497e3f2f7128a6ca347d66848da38a3d

sha512=4a76ebbafda3bc944afaff40d69791dfe153a0638ef5d7e6e1bc962b7f991d9545cd0af2d7930b39f8b31dbf067d0603cfa03d9b7a49396ab1ae452df47fd1f3

type t = private int

Flags are represented as a "bit map".

include Ppx_sexp_conv_lib.Sexpable.S with type t := t

val t_of_sexp : Sexplib0.Sexp.t -> t

val sexp_of_t : t -> Sexplib0.Sexp.t

val of_int : int -> t Core_kernel.Or_error.t

val has_multiple_segments : t -> bool

val each_segment_properly_aligned : t -> bool

val segment_unmapped : t -> bool

val next_segment_unmapped : t -> bool

val seq_is_reverse_complemented : t -> bool

val next_seq_is_reverse_complemented : t -> bool

val first_segment : t -> bool

val last_segment : t -> bool

val secondary_alignment : t -> bool

val not_passing_quality_controls : t -> bool

val pcr_or_optical_duplicate : t -> bool

val supplementary_alignment : t -> bool

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